TiDB Environment and System Configuration Check
This document describes the environment check operations before deploying TiDB. The following steps are ordered by priorities.
Mount the data disk ext4 filesystem with options on the target machines that deploy TiKV
For production deployments, it is recommended to use NVMe SSD of EXT4 filesystem to store TiKV data. This configuration is the best practice, whose reliability, security, and stability have been proven in a large number of online scenarios.
Log in to the target machines using the root
user account.
Format your data disks to the ext4 filesystem and add the nodelalloc
and noatime
mount options to the filesystem. It is required to add the nodelalloc
option, or else the TiUP deployment cannot pass the precheck. The noatime
option is optional.
Take the /dev/nvme0n1
data disk as an example:
View the data disk.
fdisk -lDisk /dev/nvme0n1: 1000 GBCreate the partition.
parted -s -a optimal /dev/nvme0n1 mklabel gpt -- mkpart primary ext4 1 -1Format the data disk to the ext4 filesystem.
mkfs.ext4 /dev/nvme0n1p1View the partition UUID of the data disk.
In this example, the UUID of nvme0n1p1 is
c51eb23b-195c-4061-92a9-3fad812cc12f
.lsblk -fNAME FSTYPE LABEL UUID MOUNTPOINT sda ├─sda1 ext4 237b634b-a565-477b-8371-6dff0c41f5ab /boot ├─sda2 swap f414c5c0-f823-4bb1-8fdf-e531173a72ed └─sda3 ext4 547909c1-398d-4696-94c6-03e43e317b60 / sr0 nvme0n1 └─nvme0n1p1 ext4 c51eb23b-195c-4061-92a9-3fad812cc12fEdit the
/etc/fstab
file and add thenodelalloc
mount options.vi /etc/fstabUUID=c51eb23b-195c-4061-92a9-3fad812cc12f /data1 ext4 defaults,nodelalloc,noatime 0 2Mount the data disk.
mkdir /data1 && \ mount -aCheck using the following command.
mount -t ext4/dev/nvme0n1p1 on /data1 type ext4 (rw,noatime,nodelalloc,data=ordered)If the filesystem is ext4 and
nodelalloc
is included in the mount options, you have successfully mount the data disk ext4 filesystem with options on the target machines.
Check and disable system swap
TiDB needs sufficient memory space for operation. When memory is insufficient, using swap as a buffer might degrade performance. Therefore, it is recommended to disable the system swap permanently by executing the following commands:
echo "vm.swappiness = 0">> /etc/sysctl.conf
swapoff -a && swapon -a
sysctl -p
Set temporary spaces for TiDB instances (Recommended)
Some operations in TiDB require writing temporary files to the server, so it is necessary to ensure that the operating system user that runs TiDB has sufficient permissions to read and write to the target directory. If you do not start the TiDB instance with the root
privilege, you need to check the directory permissions and set them correctly.
TiDB work area
Operations that consume a significant amount of memory, such as hash table construction and sorting, might write temporary data to disk to reduce memory consumption and improve stability. The disk location for writing is defined by the configuration item
tmp-storage-path
. With the default configuration, make sure that the user that runs TiDB has read and write permissions to the temporary folder (usually/tmp
) of the operating system.Fast Online DDL
work areaWhen the variable
tidb_ddl_enable_fast_reorg
is set toON
(the default value in v6.5.0 and later versions),Fast Online DDL
is enabled, and some DDL operations need to read and write temporary files in filesystems. The location is defined by the configuration itemtemp-dir
. You need to ensure that the user that runs TiDB has read and write permissions for that directory of the operating system. Taking the default directory/tmp/tidb
as an example:sudo mkdir /tmp/tidbIf the
/tmp/tidb
directory already exists, make sure the write permission is granted.sudo chmod -R 777 /tmp/tidb
Check and stop the firewall service of target machines
In TiDB clusters, the access ports between nodes must be open to ensure the transmission of information such as read and write requests and data heartbeats. In common online scenarios, the data interaction between the database and the application service and between the database nodes are all made within a secure network. Therefore, if there are no special security requirements, it is recommended to stop the firewall of the target machine. Otherwise, refer to the port usage and add the needed port information to the allowlist of the firewall service.
The rest of this section describes how to stop the firewall service of a target machine.
Check the firewall status. Take CentOS Linux release 7.7.1908 (Core) as an example.
sudo firewall-cmd --state sudo systemctl status firewalld.serviceStop the firewall service.
sudo systemctl stop firewalld.serviceDisable automatic start of the firewall service.
sudo systemctl disable firewalld.serviceCheck the firewall status.
sudo systemctl status firewalld.service
Check and install the NTP service
TiDB is a distributed database system that requires clock synchronization between nodes to guarantee linear consistency of transactions in the ACID model.
At present, the common solution to clock synchronization is to use the Network Time Protocol (NTP) services. You can use the pool.ntp.org
timing service on the Internet, or build your own NTP service in an offline environment.
To check whether the NTP service is installed and whether it synchronizes with the NTP server normally, take the following steps:
Run the following command. If it returns
running
, then the NTP service is running.sudo systemctl status ntpd.servicentpd.service - Network Time Service Loaded: loaded (/usr/lib/systemd/system/ntpd.service; disabled; vendor preset: disabled) Active: active (running) since 一 2017-12-18 13:13:19 CST; 3s agoIf it returns
Unit ntpd.service could not be found.
, then try the following command to see whether your system is configured to usechronyd
instead ofntpd
to perform clock synchronization with NTP:sudo systemctl status chronyd.servicechronyd.service - NTP client/server Loaded: loaded (/usr/lib/systemd/system/chronyd.service; enabled; vendor preset: enabled) Active: active (running) since Mon 2021-04-05 09:55:29 EDT; 3 days agoIf the result shows that neither
chronyd
norntpd
is configured, it means that neither of them is installed in your system. You should first installchronyd
orntpd
and ensure that it can be automatically started. By default,ntpd
is used.If your system is configured to use
chronyd
, proceed to step 3.
Run the
ntpstat
command to check whether the NTP service synchronizes with the NTP server.ntpstatIf it returns
synchronised to NTP server
(synchronizing with the NTP server), then the synchronization process is normal.synchronised to NTP server (85.199.214.101) at stratum 2 time correct to within 91 ms polling server every 1024 sThe following situation indicates the NTP service is not synchronizing normally:
unsynchronisedThe following situation indicates the NTP service is not running normally:
Unable to talk to NTP daemon. Is it running?
Run the
chronyc tracking
command to check wheter the Chrony service synchronizes with the NTP server.chronyc trackingIf the command returns
Leap status : Normal
, the synchronization process is normal.Reference ID : 5EC69F0A (ntp1.time.nl) Stratum : 2 Ref time (UTC) : Thu May 20 15:19:08 2021 System time : 0.000022151 seconds slow of NTP time Last offset : -0.000041040 seconds RMS offset : 0.000053422 seconds Frequency : 2.286 ppm slow Residual freq : -0.000 ppm Skew : 0.012 ppm Root delay : 0.012706812 seconds Root dispersion : 0.000430042 seconds Update interval : 1029.8 seconds Leap status : NormalIf the command returns the following result, an error occurs in the synchronization:
Leap status : Not synchronisedIf the command returns the following result, the
chronyd
service is not running normally:506 Cannot talk to daemon
To make the NTP service start synchronizing as soon as possible, run the following command. Replace pool.ntp.org
with your NTP server.
sudo systemctl stop ntpd.service && \
sudo ntpdate pool.ntp.org && \
sudo systemctl start ntpd.service
To install the NTP service manually on the CentOS 7 system, run the following command:
sudo yum install ntp ntpdate && \
sudo systemctl start ntpd.service && \
sudo systemctl enable ntpd.service
Check and configure the optimal parameters of the operating system
For TiDB in the production environment, it is recommended to optimize the operating system configuration in the following ways:
- Disable THP (Transparent Huge Pages). The memory access pattern of databases tends to be sparse rather than consecutive. If the high-level memory fragmentation is serious, higher latency will occur when THP pages are allocated.
- Set the I/O Scheduler of the storage media to
noop
. For the high-speed SSD storage media, the kernel's I/O scheduling operations can cause performance loss. After the Scheduler is set tonoop
, the performance is better because the kernel directly sends I/O requests to the hardware without other operations. Also, the noop Scheduler is better applicable. - Choose the
performance
mode for the cpufrequ module which controls the CPU frequency. The performance is maximized when the CPU frequency is fixed at its highest supported operating frequency without dynamic adjustment.
Take the following steps to check the current operating system configuration and configure optimal parameters:
Execute the following command to see whether THP is enabled or disabled:
cat /sys/kernel/mm/transparent_hugepage/enabled[always] madvise neverExecute the following command to see the I/O Scheduler of the disk where the data directory is located. Assume that you create data directories on both sdb and sdc disks:
cat /sys/block/sd[bc]/queue/schedulernoop [deadline] cfq noop [deadline] cfqExecute the following command to see the
ID_SERIAL
of the disk:udevadm info --name=/dev/sdb | grep ID_SERIALE: ID_SERIAL=36d0946606d79f90025f3e09a0c1f9e81 E: ID_SERIAL_SHORT=6d0946606d79f90025f3e09a0c1f9e81Execute the following command to see the power policy of the cpufreq module:
cpupower frequency-info --policyanalyzing CPU 0: current policy: frequency should be within 1.20 GHz and 3.10 GHz. The governor "powersave" may decide which speed to use within this range.Configure optimal parameters of the operating system:
Method one: Use tuned (Recommended)
Execute the
tuned-adm list
command to see the tuned profile of the current operating system:tuned-adm listAvailable profiles: - balanced - General non-specialized tuned profile - desktop - Optimize for the desktop use-case - hpc-compute - Optimize for HPC compute workloads - latency-performance - Optimize for deterministic performance at the cost of increased power consumption - network-latency - Optimize for deterministic performance at the cost of increased power consumption, focused on low latency network performance - network-throughput - Optimize for streaming network throughput, generally only necessary on older CPUs or 40G+ networks - powersave - Optimize for low power consumption - throughput-performance - Broadly applicable tuning that provides excellent performance across a variety of common server workloads - virtual-guest - Optimize for running inside a virtual guest - virtual-host - Optimize for running KVM guests Current active profile: balancedThe output
Current active profile: balanced
means that the tuned profile of the current operating system isbalanced
. It is recommended to optimize the configuration of the operating system based on the current profile.Create a new tuned profile:
mkdir /etc/tuned/balanced-tidb-optimal/ vi /etc/tuned/balanced-tidb-optimal/tuned.conf[main] include=balanced [cpu] governor=performance [vm] transparent_hugepages=never [disk] devices_udev_regex=(ID_SERIAL=36d0946606d79f90025f3e09a0c1fc035)|(ID_SERIAL=36d0946606d79f90025f3e09a0c1f9e81) elevator=noopThe output
include=balanced
means to add the optimization configuration of the operating system to the currentbalanced
profile.Apply the new tuned profile:
tuned-adm profile balanced-tidb-optimal
Method two: Configure using scripts. Skip this method if you already use method one.
Execute the
grubby
command to see the default kernel version:grubby --default-kernel/boot/vmlinuz-3.10.0-957.el7.x86_64Execute
grubby --update-kernel
to modify the kernel configuration:grubby --args="transparent_hugepage=never" --update-kernel /boot/vmlinuz-3.10.0-957.el7.x86_64Execute
grubby --info
to see the modified default kernel configuration:grubby --info /boot/vmlinuz-3.10.0-957.el7.x86_64index=0 kernel=/boot/vmlinuz-3.10.0-957.el7.x86_64 args="ro crashkernel=auto rd.lvm.lv=centos/root rd.lvm.lv=centos/swap rhgb quiet LANG=en_US.UTF-8 transparent_hugepage=never" root=/dev/mapper/centos-root initrd=/boot/initramfs-3.10.0-957.el7.x86_64.img title=CentOS Linux (3.10.0-957.el7.x86_64) 7 (Core)Modify the current kernel configuration to immediately disable THP:
echo never > /sys/kernel/mm/transparent_hugepage/enabled echo never > /sys/kernel/mm/transparent_hugepage/defragConfigure the I/O Scheduler in the udev script:
vi /etc/udev/rules.d/60-tidb-schedulers.rulesACTION=="add|change", SUBSYSTEM=="block", ENV{ID_SERIAL}=="36d0946606d79f90025f3e09a0c1fc035", ATTR{queue/scheduler}="noop" ACTION=="add|change", SUBSYSTEM=="block", ENV{ID_SERIAL}=="36d0946606d79f90025f3e09a0c1f9e81", ATTR{queue/scheduler}="noop"Apply the udev script:
udevadm control --reload-rules udevadm trigger --type=devices --action=changeCreate a service to configure the CPU power policy:
cat >> /etc/systemd/system/cpupower.service << EOF [Unit] Description=CPU performance [Service] Type=oneshot ExecStart=/usr/bin/cpupower frequency-set --governor performance [Install] WantedBy=multi-user.target EOFApply the CPU power policy configuration service:
systemctl daemon-reload systemctl enable cpupower.service systemctl start cpupower.service
Execute the following command to verify the THP status:
cat /sys/kernel/mm/transparent_hugepage/enabledalways madvise [never]Execute the following command to verify the I/O Scheduler of the disk where the data directory is located:
cat /sys/block/sd[bc]/queue/scheduler[noop] deadline cfq [noop] deadline cfqExecute the following command to see the power policy of the cpufreq module:
cpupower frequency-info --policyanalyzing CPU 0: current policy: frequency should be within 1.20 GHz and 3.10 GHz. The governor "performance" may decide which speed to use within this range.Execute the following commands to modify the
sysctl
parameters:echo "fs.file-max = 1000000">> /etc/sysctl.conf echo "net.core.somaxconn = 32768">> /etc/sysctl.conf echo "net.ipv4.tcp_tw_recycle = 0">> /etc/sysctl.conf echo "net.ipv4.tcp_syncookies = 0">> /etc/sysctl.conf echo "vm.overcommit_memory = 1">> /etc/sysctl.conf sysctl -pExecute the following command to configure the user's
limits.conf
file:cat << EOF >>/etc/security/limits.conf tidb soft nofile 1000000 tidb hard nofile 1000000 tidb soft stack 32768 tidb hard stack 32768 EOF
Manually configure the SSH mutual trust and sudo without password
This section describes how to manually configure the SSH mutual trust and sudo without password. It is recommended to use TiUP for deployment, which automatically configure SSH mutual trust and login without password. If you deploy TiDB clusters using TiUP, ignore this section.
Log in to the target machine respectively using the
root
user account, create thetidb
user and set the login password.useradd tidb && \ passwd tidbTo configure sudo without password, run the following command, and add
tidb ALL=(ALL) NOPASSWD: ALL
to the end of the file:visudotidb ALL=(ALL) NOPASSWD: ALLUse the
tidb
user to log in to the control machine, and run the following command. Replace10.0.1.1
with the IP of your target machine, and enter thetidb
user password of the target machine as prompted. After the command is executed, SSH mutual trust is already created. This applies to other machines as well. Newly createdtidb
users do not have the.ssh
directory. To create such a directory, execute the command that generates the RSA key. To deploy TiDB components on the control machine, configure mutual trust for the control machine and the control machine itself.ssh-keygen -t rsa ssh-copy-id -i ~/.ssh/id_rsa.pub 10.0.1.1Log in to the control machine using the
tidb
user account, and log in to the IP of the target machine usingssh
. If you do not need to enter the password and can successfully log in, then the SSH mutual trust is successfully configured.ssh 10.0.1.1[tidb@10.0.1.1 ~]$After you log in to the target machine using the
tidb
user, run the following command. If you do not need to enter the password and can switch to theroot
user, then sudo without password of thetidb
user is successfully configured.sudo -su root[root@10.0.1.1 tidb]#
Install the numactl
tool
This section describes how to install the NUMA tool. In online environments, because the hardware configuration is usually higher than required, to better plan the hardware resources, multiple instances of TiDB or TiKV can be deployed on a single machine. In such scenarios, you can use NUMA tools to prevent the competition for CPU resources which might cause reduced performance.
To install the NUMA tool, take either of the following two methods:
Method 1: Log in to the target node to install NUMA. Take CentOS Linux release 7.7.1908 (Core) as an example.
sudo yum -y install numactl
Method 2: Install NUMA on an existing cluster in batches by running the tiup cluster exec
command.
Follow Deploy a TiDB Cluster Using TiUP to deploy a cluster
tidb-test
. If you have installed a TiDB cluster, you can skip this step.tiup cluster deploy tidb-test v6.1.0 ./topology.yaml --user root [-p] [-i /home/root/.ssh/gcp_rsa]Run the
tiup cluster exec
command using thesudo
privilege to install NUMA on all the target machines in thetidb-test
cluster:tiup cluster exec tidb-test --sudo --command "yum -y install numactl"To get help information of the
tiup cluster exec
command, run thetiup cluster exec --help
command.